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LARTS Online GenBank example for amidohydrolase

<?xml version="1.0" encoding="UTF-8"?>

<Bioseq-set>
<class>
<not-set/>
</class>
<seq-set>
<Seq-entry>
<set>
<class>
<nuc-prot/>
</class>
<descr>
<Seqdesc>
<source>
<genome>
<unknown/>
</genome>
<origin>
<unknown/>
</origin>
<org>
<taxname>Bos taurus</taxname>
<common>cattle</common>
<db>
<Dbtag>
<db>taxon</db>
<tag>
<id>9913</id>
</tag>
</Dbtag>
</db>
<orgname>
<name>
<binomial>
<genus>Bos</genus>
<species>taurus</species>
</binomial>
</name>
<mod>
<OrgMod>
<subtype>
<strain/>
</subtype>
<subname>Hereford</subname>
</OrgMod>
<OrgMod>
<subtype>
<other/>
</subtype>
<subname>Vector: pCMV-SPORT6.0</subname>
</OrgMod>
</mod>
<lineage>Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos</lineage>
<gcode>1</gcode>
<mgcode>2</mgcode>
<div>MAM</div>
</orgname>
</org>
<subtype>
<SubSource>
<subtype>
<clone/>
</subtype>
<name>MGC:179382 IMAGE:8558625</name>
</SubSource>
<SubSource>
<subtype>
<tissue-type/>
</subtype>
<name>Fetal liver, 6 month male fetus, Hereford</name>
</SubSource>
<SubSource>
<subtype>
<clone-lib/>
</subtype>
<name>GC_BGC-14</name>
</SubSource>
<SubSource>
<subtype>
<lab-host/>
</subtype>
<name>DH10B</name>
</SubSource>
</subtype>
</source>
</Seqdesc>
<Seqdesc>
<comment>Contact: Robert Kirkpatrick~Canada&#39;s Michael Smith Genome Sciences Centre~BC Cancer Agency~Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, Canada, V5Z 4S6~Tel: 1-604-707-5900 x5406~Fax: 1-604-876-3561~Email: robertk@bcgsc.ca~Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S. Moore~cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan and Dr. S. Moore~cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)~DNA Sequencing by: Bovine Genome Sequencing Program, Genome Sequence Centre,~BC Cancer Agency, Vancouver, BC, Canada~info@bcgsc.bc.ca~Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, Jones S, Marra M~~Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov~Series: IRAK Plate: 320 Row: g Column: 1</comment>
</Seqdesc>
<Seqdesc>
<pub>
<pub>
<Pub>
<sub>
<authors>
<names>
<std>
<Author>
<name>
<name>
<last>Moore</last>
<initials>S.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Alexander</last>
<initials>L.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Brownstein</last>
<initials>M.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Guan</last>
<initials>L.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Lobo</last>
<initials>S.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Meng</last>
<initials>Y.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Tanaguchi</last>
<initials>M.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Wang</last>
<initials>Z.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Yu</last>
<initials>J.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Prange</last>
<initials>C.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Schreiber</last>
<initials>K.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Shenmen</last>
<initials>C.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Wagner</last>
<initials>L.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Bala</last>
<initials>M.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Barbazuk</last>
<initials>S.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Barber</last>
<initials>S.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Babakaiff</last>
<initials>R.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Beland</last>
<initials>J.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Chun</last>
<initials>E.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Del Rio</last>
<initials>L.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Gibson</last>
<initials>S.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Hanson</last>
<initials>R.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Kirkpatrick</last>
<initials>R.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Liu</last>
<initials>J.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Matsuo</last>
<initials>C.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Mayo</last>
<initials>M.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Santos</last>
<initials>R.R.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Stott</last>
<initials>J.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Tsai</last>
<initials>M.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Wong</last>
<initials>D.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Siddiqui</last>
<initials>A.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Holt</last>
<initials>R.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Jones</last>
<initials>S.J.</initials>
</name>
</name>
</Author>
<Author>
<name>
<name>
<last>Marra</last>
<initials>M.A.</initials>
</name>
</name>
</Author>
</std>
</names>
<affil>
<std>
<affil>Canada&#39;s Michael Smith Genome Sciences Centre</affil>
<div>BC Cancer Agency</div>
<city>Vancouver</city>
<sub>British Columbia</sub>
<country>Canada</country>
<street>Suite 100, 570 West 7th Avenue</street>
<postal-code>V5Z 4S6</postal-code>
</std>
</affil>
</authors>
<date>
<std>
<year>2007</year>
<month>7</month>
<day>31</day>
</std>
</date>
<descr>NIH-MGC Project</descr>
</sub>
</Pub>
</pub>
<reftype>
<seq/>
</reftype>
</pub>
</Seqdesc>
<Seqdesc>
<update-date>
<std>
<year>2008</year>
<month>6</month>
<day>9</day>
</std>
</update-date>
</Seqdesc>
</descr>
<seq-set>
<Seq-entry>
<seq>
<id>
<Seq-id>
<genbank>
<accession>BC151478</accession>
<version>1</version>
</genbank>
</Seq-id>
<Seq-id>
<gi>154425851</gi>
</Seq-id>
</id>
<descr>
<Seqdesc>
<molinfo>
<biomol>
<mRNA/>
</biomol>
<tech>
<unknown/>
</tech>
<completeness>
<unknown/>
</completeness>
</molinfo>
</Seqdesc>
<Seqdesc>
<genbank>
<keywords>
<VisibleString>MGC</VisibleString>
</keywords>
</genbank>
</Seqdesc>
<Seqdesc>
<title>Bos taurus amidohydrolase domain containing 2, mRNA (cDNA clone MGC:179382 IMAGE:8558625), complete cds</title>
</Seqdesc>
<Seqdesc>
<create-date>
<std>
<year>2007</year>
<month>8</month>
<day>2</day>
</std>
</create-date>
</Seqdesc>
</descr>
<inst>
<repr>
<raw/>
</repr>
<mol>
<rna/>
</mol>
<length>1429</length>
<topology>
<linear/>
</topology>
<seq-data>
<iupacna>GTGGGCGCCTCCGGCTCGGCTGGGCTCAGGATGCGCGGCGGGCAGGGCGCGGCGCGGGCCCCGGTGATCCAGTTCACCAACTGCCGCATCTTGAGGGGTGGCGCGCTGCTCAGGGAGGACCTCTGGGTGCGCGGGGGCCGCATCCTGGACCCGGAGAAGCTGTTCTTTGAGGAGCGGCGCGTGGCTGACGAGCAGCGGGACTGCGGCGGCTGCATCTTGGCGCCCGGCTTCATCGACGTGCAGATCAACGGTGGATTTGGCGTTGACTTCTCACAAGCCTCGGAGGACGTGGGTTCGGGGGTTGCCCTAGTGGCCCGGAGGATCCTGTCGCATGGAGTCACCTCTTTCTGCCCCACGTTGGTCACATCGCCACTGGAGGTTTATCACAAGGTCCTTCCTCAGATCCCTGTGAAGAGTGGTGGTCCCCATGGGGCAGGGGTCCTCGGGGTGCACCTGGAGGGCCCATTCATCAGCCGGGAGAAGCGGGGCGCGCACCCCGAGGCCCACCTGCGCTCCTTTGAAGCTGACGCTTTCCAAGACGTGCTGGCCACCTACGGGGGCCTGGACAATGTCCGCATCGTGACGCTGGCCCCCGAGCTGGGCCACAGCCAGGAGGTGATCCGGGCGCTGACGGCCCTCGGCATCTGCGTGTCCTTAGGGCACTCGGTGGCTGACCTGGGGACTGCGGAGGAAGCCGTGCAGAGTGGGGCCACCTTCATCACCCACCTCTTCAACGCCATGCTGCCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGACCAGCGATCGGCTGCCTGCAGGCCGTCATATTTTCTACGGGATGATTGCTGACGGTATACACACCAACCCGGCCGCCCTGCGCATCGCCCACCGGGCCCATCCCAAGGGGCTGGTGCTAGTCACTGATGCTGTCCCTGCACTGGGCTTGGGCAACGGCCGACACACGCTGGGGCAGCAGGAGGTGGAGGTGGATGGGCTGACAGCTTATGTGGCAGGCACCAACACACTGAGCGGCAGCATCGCCCCGATGGACACCTGCGTGCGGCACTTCCTGCAGGCCACAGGCTGCAGTGTGGAGTCCGCTCTGGAGGCTGCGTCCCTGCATCCAGCACAGCTGCTGGGGCTGGAGAAGCGCAAGGGGACCCTGGACTTCGGGGCTGACGCAGACTTCGTGGTGCTCGACGACTCTCTTCACGTCCGGGCCACCTACATCTCGGGCGAGCTGGTGTGGCAGGTGGAGGAGGCCAGGCCGTGACCCAGGACCACCGCTGGAGGGGATGCCCAGCCCCAGCTGGACACTGTCGGTTGGGCATTGGGGAGCTGGTCTCAAGAGAGAGGAGGGAGCCTCGGCCCAGGTGGAGGCCTCAGCCCGGAGTCGGCGGCTTGGATAAACATGTGCCCCGTAGGGAAAAAAAAAAAAAAAA</iupacna>
</seq-data>
</inst>
<annot>
<Seq-annot>
<data>
<ftable>
<Seq-feat>
<data>
<gene>
<locus>AMDHD2</locus>
<pseudo>false</pseudo>
</gene>
</data>
<location>
<int>
<from>0</from>
<to>1428</to>
<strand>
<plus/>
</strand>
<id>
<gi>154425851</gi>
</id>
</int>
</location>
<dbxref>
<Dbtag>
<db>GeneID</db>
<tag>
<id>521401</id>
</tag>
</Dbtag>
</dbxref>
</Seq-feat>
</ftable>
</data>
</Seq-annot>
<Seq-annot>
<data>
<graph>
<Seq-graph>
<title>Phrap Quality</title>
<loc>
<int>
<from>0</from>
<to>1428</to>
<strand>
<plus/>
</strand>
<id>
<gi>154425851</gi>
</id>
</int>
</loc>
<numval>1429</numval>
<graph>
<byte>
<max>90</max>
<min>89</min>
<axis>0</axis>
<values>90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 89 89 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 90 </values>
</byte>
</graph>
</Seq-graph>
</graph>
</data>
</Seq-annot>
</annot>
</seq>
</Seq-entry>
<Seq-entry>
<seq>
<id>
<Seq-id>
<genbank>
<accession>AAI51479</accession>
<version>1</version>
</genbank>
</Seq-id>
<Seq-id>
<gi>154425852</gi>
</Seq-id>
</id>
<descr>
<Seqdesc>
<molinfo>
<biomol>
<peptide/>
</biomol>
<tech>
<concept-trans/>
</tech>
<completeness>
<complete/>
</completeness>
</molinfo>
</Seqdesc>
<Seqdesc>
<genbank>
<keywords>
<VisibleString>MGC</VisibleString>
</keywords>
</genbank>
</Seqdesc>
<Seqdesc>
<title>AMDHD2 protein [Bos taurus]</title>
</Seqdesc>
<Seqdesc>
<create-date>
<std>
<year>2007</year>
<month>8</month>
<day>2</day>
</std>
</create-date>
</Seqdesc>
</descr>
<inst>
<repr>
<raw/>
</repr>
<mol>
<aa/>
</mol>
<length>409</length>
<topology>
<linear/>
</topology>
<seq-data>
<ncbieaa>MRGGQGAARAPVIQFTNCRILRGGALLREDLWVRGGRILDPEKLFFEERRVADEQRDCGGCILAPGFIDVQINGGFGVDFSQASEDVGSGVALVARRILSHGVTSFCPTLVTSPLEVYHKVLPQIPVKSGGPHGAGVLGVHLEGPFISREKRGAHPEAHLRSFEADAFQDVLATYGGLDNVRIVTLAPELGHSQEVIRALTALGICVSLGHSVADLGTAEEAVQSGATFITHLFNAMLPFHHRDPGIVGLLTSDRLPAGRHIFYGMIADGIHTNPAALRIAHRAHPKGLVLVTDAVPALGLGNGRHTLGQQEVEVDGLTAYVAGTNTLSGSIAPMDTCVRHFLQATGCSVESALEAASLHPAQLLGLEKRKGTLDFGADADFVVLDDSLHVRATYISGELVWQVEEARP</ncbieaa>
</seq-data>
</inst>
<annot>
<Seq-annot>
<data>
<ftable>
<Seq-feat>
<data>
<prot>
<name>
<VisibleString>AMDHD2 protein</VisibleString>
</name>
<processed>
<not-set/>
</processed>
</prot>
</data>
<location>
<int>
<from>0</from>
<to>408</to>
<id>
<gi>154425852</gi>
</id>
</int>
</location>
</Seq-feat>
</ftable>
</data>
</Seq-annot>
</annot>
</seq>
</Seq-entry>
</seq-set>
<annot>
<Seq-annot>
<data>
<ftable>
<Seq-feat>
<data>
<cdregion>
<frame>
<one/>
</frame>
<code>
<CHOICE>
<id>1</id>
</CHOICE>
</code>
</cdregion>
</data>
<product>
<whole>
<gi>154425852</gi>
</whole>
</product>
<location>
<int>
<from>30</from>
<to>1259</to>
<strand>
<plus/>
</strand>
<id>
<gi>154425851</gi>
</id>
</int>
</location>
<dbxref>
<Dbtag>
<db>GeneID</db>
<tag>
<id>521401</id>
</tag>
</Dbtag>
</dbxref>
</Seq-feat>
</ftable>
</data>
</Seq-annot>
</annot>
</set>
</Seq-entry>
</seq-set>
</Bioseq-set>
 
 
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