LARTS Online GenBank example for amidohydrolase
LOCUS BC151478 1429 bp mRNA linear MAM 9-JUN-2008
DEFINITION Bos taurus amidohydrolase domain containing 2, mRNA (cDNA clone MGC:179382 IMAGE:8558625), complete cds
ACCESSION BC151478
VERSION BC151478.1 GI:154425851
KEYWORDS MGC.
SOURCE Bos taurus (cattle)
ORGANISM Bos taurus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
REFERENCE 1 (bases 1 to 1429)
AUTHORS Moore, S., Alexander, L., Brownstein, M., Guan, L., Lobo, S., Meng, Y., Tanaguchi, M., Wang, Z., Yu, J., Prange, C., Schreiber, K., Shenmen, C., Wagner, L., Bala, M., Barbazuk, S., Barber, S., Babakaiff, R., Beland, J., Chun, E., Del Rio, L., Gibson, S., Hanson, R., Kirkpatrick, R., Liu, J., Matsuo, C., Mayo, M., Santos, R.R., Stott, J., Tsai, M., Wong, D., Siddiqui, A., Holt, R., Jones, S.J., Marra, M.A.
TITLE Direct Submission.
JOURNAL Submitted (31-JUL-2007) Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, British Columbia, Canada, Suite 100, 570 West 7th Avenue, V5Z 4S6
COMMENT Contact: Robert Kirkpatrick
Canada's Michael Smith Genome Sciences Centre
BC Cancer Agency
Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, Canada, V5Z 4S6
Tel: 1 604 707 5900 x5406
Fax: 1 604 876 3561
Email: robertk@bcgsc.ca
Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S. Moore
cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan and Dr. S. Moore
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Bovine Genome Sequencing Program, Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, Jones S, Marra M
Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 320 Row: g Column: 1
ORIGIN 1429 bp linear
>gi|154425851|gb|BC151478.1| Bos taurus amidohydrolase domain containing 2, mRNA (cDNA clone MGC:179382 IMAGE:8558625), complete cds
GTGGGCGCCTCCGGCTCGGCTGGGCTCAGGATGCGCGGCGGGCAGGGCGCGGCGCGGGCC
CCGGTGATCCAGTTCACCAACTGCCGCATCTTGAGGGGTGGCGCGCTGCTCAGGGAGGAC
CTCTGGGTGCGCGGGGGCCGCATCCTGGACCCGGAGAAGCTGTTCTTTGAGGAGCGGCGC
GTGGCTGACGAGCAGCGGGACTGCGGCGGCTGCATCTTGGCGCCCGGCTTCATCGACGTG
CAGATCAACGGTGGATTTGGCGTTGACTTCTCACAAGCCTCGGAGGACGTGGGTTCGGGG
GTTGCCCTAGTGGCCCGGAGGATCCTGTCGCATGGAGTCACCTCTTTCTGCCCCACGTTG
GTCACATCGCCACTGGAGGTTTATCACAAGGTCCTTCCTCAGATCCCTGTGAAGAGTGGT
GGTCCCCATGGGGCAGGGGTCCTCGGGGTGCACCTGGAGGGCCCATTCATCAGCCGGGAG
AAGCGGGGCGCGCACCCCGAGGCCCACCTGCGCTCCTTTGAAGCTGACGCTTTCCAAGAC
GTGCTGGCCACCTACGGGGGCCTGGACAATGTCCGCATCGTGACGCTGGCCCCCGAGCTG
GGCCACAGCCAGGAGGTGATCCGGGCGCTGACGGCCCTCGGCATCTGCGTGTCCTTAGGG
CACTCGGTGGCTGACCTGGGGACTGCGGAGGAAGCCGTGCAGAGTGGGGCCACCTTCATC
ACCCACCTCTTCAACGCCATGCTGCCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTC
CTGACCAGCGATCGGCTGCCTGCAGGCCGTCATATTTTCTACGGGATGATTGCTGACGGT
ATACACACCAACCCGGCCGCCCTGCGCATCGCCCACCGGGCCCATCCCAAGGGGCTGGTG
CTAGTCACTGATGCTGTCCCTGCACTGGGCTTGGGCAACGGCCGACACACGCTGGGGCAG
CAGGAGGTGGAGGTGGATGGGCTGACAGCTTATGTGGCAGGCACCAACACACTGAGCGGC
AGCATCGCCCCGATGGACACCTGCGTGCGGCACTTCCTGCAGGCCACAGGCTGCAGTGTG
GAGTCCGCTCTGGAGGCTGCGTCCCTGCATCCAGCACAGCTGCTGGGGCTGGAGAAGCGC
AAGGGGACCCTGGACTTCGGGGCTGACGCAGACTTCGTGGTGCTCGACGACTCTCTTCAC
GTCCGGGCCACCTACATCTCGGGCGAGCTGGTGTGGCAGGTGGAGGAGGCCAGGCCGTGA
CCCAGGACCACCGCTGGAGGGGATGCCCAGCCCCAGCTGGACACTGTCGGTTGGGCATTG
GGGAGCTGGTCTCAAGAGAGAGGAGGGAGCCTCGGCCCAGGTGGAGGCCTCAGCCCGGAG
TCGGCGGCTTGGATAAACATGTGCCCCGTAGGGAAAAAAAAAAAAAAAA
FEATURES Location/Qualifiers
source 1..1429
/organism="Bos taurus"
/genus="Bos"
/species="taurus"
/mol_type="mRNA"
/dbxref="taxon:9913"
/clone="MGC:179382 IMAGE:8558625"
/tissue-type="Fetal liver, 6 month male fetus, Hereford"
/clone-lib="GC_BGC-14"
/lab-host="DH10B"
/strain="Hereford"
/other="Vector: pCMV-SPORT6.0"
gene 1..1429
/gene="AMDHD2"
/db_xref="GeneID:521401"
CDS 31..1260
/gene="AMDHD2"
/codon_start="1"
/db_xref="GeneID:521401"
/product="AMDHD2 protein"
/protein_id="AAI51479.1"
/db_xref="GI:154425852"
/translation="MRGGQGAARAPVIQFTNCRILRGGALLREDLWVRGGRILDPEKLFFEERRVADEQRDCGGCILAPGFIDVQINGGFGVDFSQASEDVGSGVALVARRILSHGVTSFCPTLVTSPLEVYHKVLPQIPVKSGGPHGAGVLGVHLEGPFISREKRGAHPEAHLRSFEADAFQDVLATYGGLDNVRIVTLAPELGHSQEVIRALTALGICVSLGHSVADLGTAEEAVQSGATFITHLFNAMLPFHHRDPGIVGLLTSDRLPAGRHIFYGMIADGIHTNPAALRIAHRAHPKGLVLVTDAVPALGLGNGRHTLGQQEVEVDGLTAYVAGTNTLSGSIAPMDTCVRHFLQATGCSVESALEAASLHPAQLLGLEKRKGTLDFGADADFVVLDDSLHVRATYISGELVWQVEEARP"
graph 1..1429
/graph_title="Phrap Quality"
/graph_numvals="1429"
/gene="AMDHD2"
//