LARTS Online GenBank example for actin
LOCUS BC142519 2878 bp mRNA linear MAM 9-JUN-2008
DEFINITION Bos taurus actin binding LIM protein family, member 3, mRNA (cDNA clone MGC:148584 IMAGE:8288367), complete cds
ACCESSION BC142519
VERSION BC142519.1 GI:148743898
KEYWORDS MGC.
SOURCE Bos taurus (cattle)
ORGANISM Bos taurus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
REFERENCE 1 (bases 1 to 2878)
AUTHORS Moore, S., Alexander, L., Brownstein, M., Guan, L., Lobo, S., Meng, Y., Tanaguchi, M., Wang, Z., Yu, J., Prange, C., Schreiber, K., Shenmen, C., Wagner, L., Bala, M., Barbazuk, S., Barber, S., Babakaiff, R., Beland, J., Chun, E., Del Rio, L., Gibson, S., Hanson, R., Kirkpatrick, R., Liu, J., Matsuo, C., Mayo, M., Santos, R.R., Stott, J., Tsai, M., Wong, D., Siddiqui, A., Holt, R., Jones, S.J., Marra, M.A.
TITLE Direct Submission.
JOURNAL Submitted (7-JUN-2007) Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, British Columbia, Canada, Suite 100, 570 West 7th Avenue, V5Z 4S6
COMMENT Contact: Robert Kirkpatrick
Canada's Michael Smith Genome Sciences Centre
BC Cancer Agency
Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, Canada, V5Z 4S6
Tel: 1 604 707 5900 x5406
Fax: 1 604 876 3561
Email: robertk@bcgsc.ca
Tissue Procurement: L. Savio, Y. Meng, L. Guan and S. Moore
cDNA Library Preparation: L. Savio, Y. Meng, L. Guan and Dr. S. Moore
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Bovine Genome Sequencing Program, Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, Jones S, Marra M
Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 292 Row: k Column: 5
ORIGIN 2878 bp linear
>gi|148743898|gb|BC142519.1| Bos taurus actin binding LIM protein family, member 3, mRNA (cDNA clone MGC:148584 IMAGE:8288367), complete cds
GGGCGAGCCCGCATCATGGATGTCGAGCTCTCCTATTTCGCTTTGCTCGCCTCAGAATTC
GAGACCCCAGACGAGGACCAGGATTCATGAACTGGTCTCAGGGGCCCGGGCAGGGGCCTC
TGGCTCCCGACGCTGGCCGAGAGGTGATGAGTGAAGTCGAAAGATCCGAAGATTTAAAAA
GCATCTGGAGTCTCCGTATTGAATGAAAAACCCAGTGCAAAGGCATCATCATGAACACGA
GCCTTCCGTATCAGCAGAATCCTTACAGTCCCCGGGGCAGCTCCAATGTCATCCAGTGCT
ACCGATGTGGAGACACCTGCAAAGGGGAGGTGGTTCGTGTCCACAATAACCACTTCCACA
TCAGATGCTTCACCTGTCAAGTGTGTGGCTGTGGCCTAGCCCAGTCGGGCTTCTTCTTCA
AGAACCAGGAGTACATCTGCACGCAGGACTACCAGCAGCTCTACGGCACCCGCTGCGACA
GCTGCCGGGACTTCATCACAGGCGAGGTCATCTCCGCGCTGGGCCGCACCTACCACCCCA
AGTGCTTCGTGTGCAGCTTGTGCAAGAAGCCTTTCCCCATTGGAGACAAGGTGACCTTCA
GTGGGAAGGAATGCTTATGTCAGACGTGCTCCCAGTCCATGACCAGCAGTAAGCCCATCA
AGATCCGCGGACCAAGCCACTGTGCTGGGTGCAAGGAGGAGATCAAGCATGGCCAGTCGC
TCCTGGCGCTGGACAAGCAGTGGCACGTCAGCTGCTTCAAATGCCAGACCTGCAGTGTCA
TCCTCACTGGGGAGTACATCAGCAAGGATGGCGTTCCGTACTGTGAGTCTGACTACCACT
CCCAGTTTGGCATTAAGTGCGAGACTTGTGACCGATACATCAGCGGCAGGGTCTTGGAGG
CGGGAGGGAAGCACTACCACCCCACCTGCGCCAGATGTGTGCGCTGCCACCAGATGTTCA
CCGAGGGGGAGGAGATGTACCTCACAGGTTCTGAGGTCTGGCACCCCATCTGCAAGCAGG
CAGCCCGGGCAGAGAAGAAGTTAAAGCATCGGCGGACGTCTGAAACTTCCATCTCACCCC
CTGGCTCTAGCATCGGGTCACCCAACCGAGTCATCTGCGCTAAAGTGGATAATGAGATCC
TTAATTACAAAGACCTGGCAGCTCTCCCCAAGGTTAAGTCAATCTACGAGGTACAACGCC
CTGACCTCATTTCCTACGAGCCTCATTCCAGATACACGTCCGACGAGATGCTGGAGAGGT
GTGGCTATGGAGAGTCGCTGGGAACCTTATCTCCCTATTCCCAGGACATCTATGAGAACC
TGGACCTCCGGCAGAGACGGGCCTCCAGCCCAGGATACATCGACTCCCCCACCTACAGCA
GGCAGGGCATGTCCCCCACCTTCTCCCGCTCACCTCATCACTACTACCGCTCCGGGCCCG
AGAGTGGCCGGAGCTCTCCATACCATAGCCAGTTAGATGTGAGGTCCTCCACTCCGACCT
CTTACCAGGCTCCCAAGCACTTTCACATCCCAGCTGGAGAAAGTAACATCTACCGGAAAC
CCCCGATCTACAAGCGGCATGGTGATTTGTCGACAGCAACCAAGAGCAAAACAAGTGAAG
ACATCAGCCAGGCCTCTAAGTACAGTCCAGCCTACTCGCCAGACCCGTACTATGCGACAG
AGTCTGAGTACTGGACCTACCACGGGTCCCCCAAAGTGCCCCGAGCCAGAAGATTCTCAT
CTGGAGGAGAGGAGGACGACTTTGACCGCAGTATGCACAAGCTCCAGAGCGGAATTGGCA
GACTGATTCTGAAGGAAGAGATGAAGGCCAGGTCCAGTTCCTATGCAGACCCCTGGACCC
CGCCCCGGAGCTCCACCAGCAGCCGGGAGGCCCTGCACACAGCTGGCTACGATGTGTCCC
TAAATGGCTCCCCTCGGTCCCACTACCTGGCTGACAGTGATCCCCTCATCTCTAAATCTG
CCTCCCTGCCTGCCTACAGAAGAAACGGGCTGCACAGGACACCCAGCGCAGACCTATTCC
ACTACGACAGCATGAACGCCGTCAACTGGGGCATGCGAGAGTACAAGATCTACCCTTACG
AACTGCTACTGGTGACCACAAGAGGGAGAAACCGACTGCCCAAGGATGTGGACCGGACGC
GTTTAGAGCGCCACCTGTCCCAGGAAGAGTTCTACCAGGTCTTTGGCATGACCATCTCCG
AGTTTGACCGGCTGGCCCTCTGGAAGAGGAATGAACTCAAGAAGCAAGCCCGGCTGTTCT
AGGCAGAGGCTCTATAAATATATATGCATTTATATAAAGATATATGTAAAATCTCTATAC
TGAAGCTCGGTATAATCCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCTTT
TCTGTATCGTCAGGCAAGCCCACATCATCAAGATATTTTTATGCTCCTTACTTTCTCTTT
TTTAAGTGCAATGGGGTTTGGGAAGGAATTTGTGGGGACTCCCATCCTTTTACTGGGGAG
CCTTTTTATACTGAAACATCTGTCCTGACTTGAGTCCCCCAGGGTCCAACTCTCTTTCCT
GAAAGAGGTGCCTGAAGGAGTCTCTCTTCTCTCTGCTTCTCGGCTCTTCCCCCAACCTCC
AGGGACGATGCTGACCGTGCAGTTTTCACACTTCACTGGCCCCAGAGGGGCCCTTCTCAA
GGGGGATCCACAGCGTTCTCCCCGAGTCACTGAACACCTTTGAGAGCCCTGAAGAATTTT
CTTATCCCCCCCATTAGGACCTCAGTGCTGTCTGGGGGTGATGCAGCTAGAAATGTGGGT
TTCACGTCTATTCGTTACAGAAATAAACAGAAATGGATAGGGAAAAAAAAAAAAAAAA
FEATURES Location/Qualifiers
source 1..2878
/organism="Bos taurus"
/genus="Bos"
/species="taurus"
/mol_type="mRNA"
/dbxref="taxon:9913"
/clone="MGC:148584 IMAGE:8288367"
/tissue-type="Fetal brain, cerebral cortex, male fetus 6 months, strain Hereford"
/clone-lib="GC_BGC-18"
/lab-host="ElectroMAX DH10B T1 Phage Resistent cells"
/strain="Hereford"
/other="Vector: pCMV.SPORT6.0"
gene 1..2878
/gene="ABLIM3"
/db_xref="GeneID:613794"
CDS 231..2282
/gene="ABLIM3"
/codon_start="1"
/db_xref="GeneID:613794"
/product="ABLIM3 protein"
/protein_id="AAI42520.1"
/db_xref="GI:148743899"
/translation="MNTSLPYQQNPYSPRGSSNVIQCYRCGDTCKGEVVRVHNNHFHIRCFTCQVCGCGLAQSGFFFKNQEYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYHPKCFVCSLCKKPFPIGDKVTFSGKECLCQTCSQSMTSSKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILTGEYISKDGVPYCESDYHSQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICAKVDNEILNYKDLAALPKVKSIYEVQRPDLISYEPHSRYTSDEMLERCGYGESLGTLSPYSQDIYENLDLRQRRASSPGYIDSPTYSRQGMSPTFSRSPHHYYRSGPESGRSSPYHSQLDVRSSTPTSYQAPKHFHIPAGESNIYRKPPIYKRHGDLSTATKSKTSEDISQASKYSPAYSPDPYYATESEYWTYHGSPKVPRARRFSSGGEEDDFDRSMHKLQSGIGRLILKEEMKARSSSYADPWTPPRSSTSSREALHTAGYDVSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADLFHYDSMNAVNWGMREYKIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLF"
graph 1..2878
/graph_title="Phrap Quality"
/graph_numvals="2878"
/gene="ABLIM3"
//