LARTS Online GenBank example for aldolase
LOCUS BC142385 1719 bp mRNA linear MAM 9-JUN-2008
DEFINITION Bos taurus aldolase B, fructose-bisphosphate, mRNA (cDNA clone MGC:159510 IMAGE:8177098), complete cds
ACCESSION BC142385
VERSION BC142385.1 GI:148745534
KEYWORDS MGC.
SOURCE Bos taurus (cattle)
ORGANISM Bos taurus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
REFERENCE 1 (bases 1 to 1719)
AUTHORS Moore, S., Alexander, L., Brownstein, M., Guan, L., Lobo, S., Meng, Y., Tanaguchi, M., Wang, Z., Yu, J., Prange, C., Schreiber, K., Shenmen, C., Wagner, L., Bala, M., Barbazuk, S., Barber, S., Babakaiff, R., Beland, J., Chun, E., Del Rio, L., Gibson, S., Hanson, R., Kirkpatrick, R., Liu, J., Matsuo, C., Mayo, M., Santos, R.R., Stott, J., Tsai, M., Wong, D., Siddiqui, A., Holt, R., Jones, S.J., Marra, M.A.
TITLE Direct Submission.
JOURNAL Submitted (7-JUN-2007) Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, British Columbia, Canada, Suite 100, 570 West 7th Avenue, V5Z 4S6
COMMENT Contact: Robert Kirkpatrick
Canada's Michael Smith Genome Sciences Centre
BC Cancer Agency
Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, Canada, V5Z 4S6
Tel: 1 604 707 5900 x5406
Fax: 1 604 876 3561
Email: robertk@bcgsc.ca
Tissue Procurement: Y. Meng, M. Taniguchi, S. Lobo, L. Guan and S. Moore
cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan and Dr. S. Moore
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Bovine Genome Sequencing Program, Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, Jones S, Marra M
Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 301 Row: e Column: 8
ORIGIN 1719 bp linear
>gi|148745534|gb|BC142385.1| Bos taurus aldolase B, fructose-bisphosphate, mRNA (cDNA clone MGC:159510 IMAGE:8177098), complete cds
GAGAGCTGCGCCGTGGGAGGTGAGGCTTCCGCGCGCGTCCAAATCCTGCGGCTGCCGCTC
CTCCGAGGCCTCAAGGTCCAGCGATGGCTCCTCCGTGGTCATGAGCCAGACAGCCTAGGC
GACTTCGGCAGTGGCCGTCAGCGTGCTCAGAGAACCGAGCTGACCGCTCTCACCCGACCT
GTCACCATGGCCCACCAGTTTCCAGCCCTCACTTCAGAACAGAAGAAGGCACTCTCAGAA
ACTGCCCGACGCATTGTTGCCAATGGGAAGGGGATCCTGGCTGCAGATGAGTCCGTAGGC
ACGATGGGGAACCGCCTGCAAAGGATCAAGGTGGAGAACACGGAAGAGAACCGCCGGCAG
TTCCGCGAACTCCTCTTCACTGTGGACAGCTCCATCAGCCAGAGCATCGGGGGTGTGATC
CTCTTCCATGAGACCCTCTACCAGAAGGACGGCCAGGGAAAACTGTTCAGAGACATCCTC
AAGGAAAAAGGGATCGTGGTGGGAATCAAGTTAGATCAAGGAGTTGCTCCGCTTGCAGGA
ACAAACAAAGAAACCACCGTTCAAGGGCTTGATGGCCTTTCTGAACGCTGTGCTCAGTAT
AAGAAAGATGGTGCTGACTTTGGGAAGTGGCGTGCTGTGCTGAAGATTGACAACCAGTGT
CCATCCCATCTTGCTATCCAGGAAAACGCCAACACCCTCGCCCGCTATGCCAGCATCTGT
CAGCAGAATGGTCTGGTACCCATTGTTGAGCCAGAGGTAATTCCTGATGGCAGCCATGAC
ATGGAACACTGCCAGTATGTTACTGAGAAGGTCCTGGCTGCTGTATACAAGGCCCTGAAT
GACCATCACGTTTACTTGGAGGGCACCCTGTTGAAGCCCAACATGGTGACTGCTGGACAT
GCCTGCACCAAGAAGTATACTCCAGAGCAGGTGGCAATGGCCACAGTTACAGCTCTCCAC
CGTACTGTTCCTGCAGCTGTTCCTGGCATCTGCTTTTTGTCTGGTGGCATGAGTGAAGAG
GATGCTACTCTCAACCTCAATGCTATCAACCTTTGCCCTCTACCAAAGCCCTGGAAACTA
AGTTTCTCTTATGGACGGGCCCTGCAGGCCAGTGCACTGGCTGCGTGGGGTGGCAAGGCT
GAAAACAAGAAGGCAACCCAGGAGGCCTTTATGAAGCGGGCCCTGGCTAACAGCCAGGCA
GCCAAAGGACAGTATGTTCACATGGGCTCTTCTGGCTCTGCTTCCACCCAGTCGCTCTTC
ACTGCCAGCTATACCTACTAGAACCCGAGGCTGACCAGCTTGGCTCTGGCGCTCTAGGTG
TCTTGGTAGGAGGGCTAAAAGGAAACAACGACTTTTCGACTGACCCTGGAAATTAGATGA
AATTAGGTTGCAAGCTACTGGAAACACAACACATGTTAATTTCTTAGACACAAGTGGAAA
AAAATCAGTTATGGAAACAAGTCTGAATATCAGGGATCTGATGAAATCTCACCCAATGGT
TTCTAGCTCCCCACACCCCAAAGAGTCTATCTAAGAAAAGAACAGACTTTAAAACAGAAC
CAGCTCTCCATCCAGATCACCAAATGAAATACCTCCCAAGCTGAGTGCAGAGAAGCGCAT
CTTATTAAACAGTTTTAGCAGTGGTAGGTTATGAAGGAGACAGCTGCAACCAGAAAATGA
AATAAAATGTTCTACAAACCTTCAAAAAAAAAAAAAAAA
FEATURES Location/Qualifiers
source 1..1719
/organism="Bos taurus"
/genus="Bos"
/species="taurus"
/mol_type="mRNA"
/dbxref="taxon:9913"
/clone="MGC:159510 IMAGE:8177098"
/tissue-type="Heart ventrical, 8.5 month female Hereford"
/clone-lib="GC_BGC-12"
/lab-host="DH10B"
/strain="Hereford"
/other="Vector: pCMV-SPORT6.0"
gene 1..1719
/gene="ALDOB"
/db_xref="GeneID:515263"
CDS 187..1281
/gene="ALDOB"
/codon_start="1"
/db_xref="GeneID:515263"
/product="ALDOB protein"
/protein_id="AAI42386.1"
/db_xref="GI:148745535"
/translation="MAHQFPALTSEQKKALSETARRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFTVDSSISQSIGGVILFHETLYQKDGQGKLFRDILKEKGIVVGIKLDQGVAPLAGTNKETTVQGLDGLSERCAQYKKDGADFGKWRAVLKIDNQCPSHLAIQENANTLARYASICQQNGLVPIVEPEVIPDGSHDMEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY"
graph 1..1719
/graph_title="Phrap Quality"
/graph_numvals="1719"
/gene="ALDOB"
//